Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_TTC3_0026400

Sequence Length

407 nt

GC Content

0.3710

AUCUCAAAGACGGAAUUAGAUUGGUUCCUUCAAGAUUUGGAAAGAGAAAUUAAAAAAUGGCAACAGGAAAAAAAAGAAAUCCAAGAAAGACUAAAAUCACUGAAGAAGAAAAUUAAAAAGGUUUCAAAUGCCAGUGAAAUGUAUACCCAGAAAAAUGAUGGAAAGGAAAAGGAACAUGAAUUACAUCUGGAUCAGUCCCUUGAAAUCAGCAACACACUUACAAAUGAGAAAAUGAAAAUAGAAGAGUAUAUAAAGAAAGGGAAAGAGGAUUAUGAAGAGAGUCAUCAGAGAGCUGUGGCUGCAGAGGUAUCCGUACUUGAAAACUGGAAGGAGAGUGAAGUGUAUAAGCUACAGAUCAUGGAGUCACAAGCAGAAGCCUUUCUGAAGAAGCUGGGGCUGAUUAGCCG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-63.20 kcal/mol

Ensemble Metrics

Free Energy: -73.02

Frequency: 0.0000

Diversity: 83.97

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((.............))))(((((.(((((.((((((((................((....))..............))))...........))))..))))).............(.((((((........)))))).)....(((((.((.(.(((..............))).).))...)))))(((((((((.................((((....))))................(((......(((((((....((.((((........)))).)).....(((((((((.((.....(((.(((((((...(((.............)))...)))).))).)))..)).)))))).))).....)))))))......)))))))))))).)))))

Thermodynamic Ensemble Prediction

((((..,........}|))))((((({{,{{....,{{||,........,.......{{....},(({...........)))..............((((((.....{{((,{{.....},)))}...,..)))))).........(((((..,.{.(((..............))).}.}}...)))))(((((((((,,,....||.,......(((,....})))................{{{......(((((((....({.((({.,......}))).)).....(((((((((.((...{.{((.(((((({...(((..........|..}}},,.}}}).))).}})).)).)))))),,)).....)))))))......))))))))))))..))))