Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_TTC3_0027400

Sequence Length

294 nt

GC Content

0.4048

GUAUCCGUACUUGAAAACUGGAAGGAGAGUGAAGUGUAUAAGCUACAGAUCAUGGAGUCACAAGCAGAAGCCUUUCUGAAGAAGCUGGGGCUGAUUAGCCGUGAUCCUGCAGCAUAUCCUGACAUGGAGUCUGAUAUACGUUCAUGGGAAUUGUUUCUUUCUAAUGUUACAAAAGAAAUUGAGAAAGCAAAGUCUCAGUUUGAAGAACAAAUUAAGGCAAUUAAAAAUGGUUCUCGGCUCAGUGAACUUUCUAAAGUGCAGAUUUCUGAGCUUUCAUUUCCUGCCUGUAACACG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-65.30 kcal/mol

Ensemble Metrics

Free Energy: -72.89

Frequency: 0.0000

Diversity: 77.48

Structure Visualization

Structure Prediction

MFE Structure Prediction

(...)(((..........(((((((((((((((((((((..(((.((((((((((.......(((...(((..(((....))))))...)))......))))))).))).)))...(((......))).....)))))).)))))........))))))))))..(((((.....(((((((((........))))))))).............(((((.....((((((.....(((((((((.((((....)))).)).....))))))).))))))..)))))))))))))

Thermodynamic Ensemble Prediction

({,.,,,|}}{,,...((.((.(((((({((((,.,.,...(((.((((((((((,{{{...{((...(((,(({,....))})))...))))}},..)))))))},)).))){{{((,.(((..,,.}}}.}))))||{{|,,,{((((,,,{||||||||}}}}|,.......{((((((((........))))))))}{.,{{{|,.,|{{|,,...,,,,.,,,,))))))(((((((,(,{(({....,}}}.,),.,,.))))))))))))))))).)).))...},)