Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_TULP4_0003200

Sequence Length

250 nt

GC Content

0.3440

CAAUAUCUAAUGUCUGGCUUACUUAAAGAUGGCUAGGUUCUCAUAUUUGCUUCUACAUUUAAUCUUGCAAUAUGUCGUUUUUGUUGAAGUAUAUGAAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGAGGAGUGGUUGGGGUGACUUUCACCUCUAGUCACUGUCGCAGGGACAGGAGUACUCCACAGAGGAUAAAUUUCAACCUCCGGGGCCACAAUAGCGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-43.60 kcal/mol

Ensemble Metrics

Free Energy: -49.50

Frequency: 0.0001

Diversity: 54.74

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....((.....(((((((...........)))))))(((((((((..(((((.(((...(((...(((...))).)))..))).)))))))))).))))..................................................((.....((((..(((((((...)))))))((.((.(((((.....))))))).))((((...((((...........)))).))))))))....)))).

Thermodynamic Ensemble Prediction

(,....,...}},((,(((..,,....,.{||||}|,{(((((((,.,(((((.(((...,{,...((,...,)}.},,..))).))))))))))},))}..................................................(({{..{((((({(((((((...)))))})|}}}}}||,||}}.,,|}},|||,|.,|||...{{||,......,,..)))).,,)))))}...})},))