Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_UBAC2_0003200

Sequence Length

470 nt

GC Content

0.4277

CCACAUGGAUGGAACUAGAAGACAUGUAAGUGAAAUAAGAACAAAAAGACAAAGAUUGCAUGUUCUCACACGUGGAAGCUAAAAUAGUGGAUCUCAUGAAGACAGAGAGUAGACAAGGCGCCUCUGUCGAAGAGCCUUCUGCUGGUCCCCAGUGCCCUCUCCCUCCUGCUCGCCCUCCUCCUGCCUCACUGCCAGAAGCUCUUUGUGUAUGACCUUCACGCAGUCAAGAACGACUUCCAGAUUUGGAGGUUGAUAUGUGGAAGAAUAAUUUGCCUUGAUUUGAAAGAUACUUUCUGCAGUAGUCUGCUUAUUUAUAAUUUUAGGAUAUUUGAAAGAAGAUAUGGAAGCAGAAAAUUUGCAUCCUUUUUGCUGGGUUCCUGGGUUUUGUCAGCCUUAUUUGACUUUCUCCUCAUUGAAGCUAUGCAGUAUUUCUUUGGCAUCACUGCAGCUAGUAAUUUGCCUUCUGGAUU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-110.20 kcal/mol

Ensemble Metrics

Free Energy: -120.02

Frequency: 0.0000

Diversity: 164.16

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((......)))(((((((((((((((((..........................))))))))((..(((((.(((.(((....((((((....((.((.((..(.((((((..(((((.(.((....)).).)))))..(((((...)))))............)))))).)..)).)).))..)))))).....)))))).)))))..)).((((.((((........(((((((((....)))))))))...))))))))..........(((.......))).((((..(((((((.(..((((................((((((......))))))(((.(((((...))))).)))...(((((((.(((.((((....(((((......))))).....)).))..))).))).)))).........)))).))))))))..))))......))))))).))

Thermodynamic Ensemble Prediction

(((......)))(((((((((.((,{{{(((.({{{{{(.,,,....,,,..,,.||,{{||||||.,{|||||,|,{{{....{{({(({.{{{,,,..(((((((,((,{...,,||,,}||}}}},,|}}},,,}}||||{{..,||||}{{,{........|,||,,.,..,,.,,.,|..,.{{{{{..{{{|,||,.,......)).})))..))))}...,..(((((((((....)))))))))..,}}}}|,|||,.,..,,,},..,,,..(((((...})))),((((...,||||{,...,,,..,{{{||,{,,{||,,,,..}}))),{{|,|||||...,)))),}}}....|||,||}|,,}||||.,,,|||{,.}}}}})),))},.,.,,.....))|{|||,|||{{..,.|....),}..))))))},},},....}).))))))).))