Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_UBAC2_0003900

Sequence Length

406 nt

GC Content

0.4458

ACAAGGCGCCUCUGUCGAAGAGCCUUCUGCUGGUCCCCAGUGCCCUCUCCCUCCUGCUCGCCCUCCUCCUGCCUCACUGCCAGAAGCUCUUUGUGUAUGACCUUCACGCAGUCAAGAACGACUUCCAGAUUUGGAGGUUGAUAUGUGGAAGAAUAAUUUGCCUUGAUUUGAAAGAUACUUUCUGCAGUAGUCUGCUUAUUUAUAAUUUUAGGAUAUUUGAAAGAAGAUAUGGAAGCAGAAAAUUUGCAUCCUUUUUGCUGGGUUCCUGGGUUUUGUCAGCCUUAUUUGACUUUCUCCUCAUUGAAGCUAUGCAGUAUUUCUUUGGCAUCACUGCAGCUAGUAAUUUGCCUUCUGGAUUUGACCGUAGACUACCAGAUCGGAAACUUUUUCUGCGCAUGCUUCGAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-90.80 kcal/mol

Ensemble Metrics

Free Energy: -101.26

Frequency: 0.0000

Diversity: 122.48

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((((.......((((((((.(((((.((((...(((............................)))....)))).)))))))))))))........((((.((((........(((((((((....)))))))))...)))))))).......)))))))....(((((...))))).((((...(((((((...(((..((((((.....))))))....)))...)))))))....))))((((........))))....(((....(((((......)))))....))))(.(((((((.((((...........((((..((((....))))....)))).(((((.((((....))))...))))).((((((...)))))).))))))))))).)

Thermodynamic Ensemble Prediction

,(((((({..,,...((((((({{((((({(((,..}|||,{,............|...,,.........},...|||}|})))))))))))).....},.((((.((((|{{,....{{(((((((....)))))))))},.)))))))).......,)))))).,,,(((((...}}}}|{((((,.,(((((,,...{,,..,{{{{{,{,,{||,,}}..}}))),{{|,|||||...,)))),}}}...,{{{{||.{{{.,(((....(((({......})))).....))}|,,,|||,|}|,||}|....,,,..((((..,,(({....}))....)))).{{{((,,{{{...,}))),,,))))).{|{{{|...,}}))),},}}))))))))}