Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_UBAC2_0004000

Sequence Length

417 nt

GC Content

0.4317

ACAAGGCGCCUCUGUCGAAGAGCCUUCUGCUGGUCCCCAGUGCCCUCUCCCUCCUGCUCGCCCUCCUCCUGCCUCACUGCCAGAAGCUCUUUGUGUAUGACCUUCACGCAGUCAAGAACGACUUCCAGAUUUGGAGGUUGAUAUGUGGAAGAAUAAUUUGCCUUGAUUUGAAAGAUACUUUCUGCAGUAGUCUGCUUAUUUAUAAUUUUAGGAUAUUUGAAAGAAGAUAUGGAAGCAGAAAAUUUGCAUCCUUUUUGCUGGGUUCCUGGGUUUUGUCAGCCUUAUUUGACUUUCUCCUCAUUGAAGCUAUGCAGUAUUUCUUUGGCAUCACUGCAGCUAGUAAUUUGCCUUCUGGAUUAAUGAAGGAUGUGAGAGAAUAAACUGCCACCAUUCAAGUGUUUCAAGAGAAGCUUAAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-94.90 kcal/mol

Ensemble Metrics

Free Energy: -104.99

Frequency: 0.0000

Diversity: 131.16

Structure Visualization

Structure Prediction

MFE Structure Prediction

..((((((((...((.((((...)))).)).))).(((((.((((........(((((.((..((.(((......(((((..((((.((.........)).))))..)))))......(((((((((....)))))))))......))).)).................(((((...))))).)))))))(((((((...(((..((((((.....))))))....)))...)))))))......(((.......))).))))..)))))........))))).(((((.((((((....(((((((..((((((..((((((.(((((...((((........))))((((.........))))))))).))))))...))))).........)..))))))))))))).))))).

Thermodynamic Ensemble Prediction

,{(((((..,{{,,.{{{||{|||{{{{{{{((..,|{((.({,{........,.{,..,........,.|,...{{{{{.,|{{|,||,,,,.....)).||}}.,}||}},,.,..(((((((((....)))))))))...,},}}}}}......,,,}}},}.,,.(((((...))))),((((...,||||{{...{,,..{{{{|||,,,{||,,,}..}}))),{{|}|||||....)))),}||....,,,.)))}..}}|||....{{{{|,.....||||},,,{{|,.,.(((((,,...(((((..((((((.(((((.,,,((,.,,,....,,,}({{{.,,......)}))))))).))))))...))))).....}}},},,)}}}}},})))))})},,}}