Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ZBTB44_0003100

Sequence Length

356 nt

GC Content

0.4663

GCUCAGUAGAUGAAGGCGUUUCUGAGGGCUUGCCUACACUUCAAAGCACGUCUAGCACUAAUGCUCCUCCGGAUGAUGAUGAUCGAUUGGAAAAUGUUCAGUAUCCCUACCAACUCUACAUUGCUCCUUCCACCAGCAGUACAGAGCGACCAAGUCCAAAUGGUCCCGACAGACCUUUUCAGUGUCCAACCUGCGGGGUGCGAUUCACCCGUAUUCAGAACCUAAAGCAGCACAUGCUCAUCCACUCAGGGCAUCCCAGGAAAUCAGCUUCUAGAUCUAGCUCUGCCACUAACUGCUGUUGAUUAAACCUGUCACUUUACACAUGAAAAAGCUUGAAACUUAGAGAAAGAUAAAAU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-69.40 kcal/mol

Ensemble Metrics

Free Energy: -77.34

Frequency: 0.0000

Diversity: 106.11

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((((.(((((((((((((.(((((...........))))).)).))))))((((....))))..(((((.((((....)))).)))))....((((.(((....)))...((((..((((((.........))))))..)))).(((((........)))))..((((...........)))).....((((((..........))))))....)))).....(((.....)))))))).)))..))))((..((((.(((((((..(.((...(((........))).)))..)))))))...))))....................(((........))).........))

Thermodynamic Ensemble Prediction

(((((({.((((,{{(||||{|(({(({,,,,,..,..}||||,||,}}}}}}((({....))))..{((((.((((....)))).))))).,,,{{..{({..........,||{{,,|||(((.........|}}}}}..|))),(((((........)))))..{{{{|,,,,....,,}))).....(((((({{{.....}})))))}..,,},,,,...{(((.....))))}}}}.}}}..)))){{..{{((.(((({({..,,{{...,,||,,,}...,,,.))),,)))))}}...}}}),,.,{{,......,.....}|||,,....},),}..,,.....})