Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ZBTB44_0003300

Sequence Length

301 nt

GC Content

0.4751

GAAUUAAACCAUUUCAGUGUGACCGCUGUGGGAAAAAGUUCACCAGGGCUUACUCGCUAAAGAUGCAUCGCCUAAAGCAUGAAGGUAAACGCUGUUUCCGGUGCCAGAUAUGUAGUGCCACUUUCACUUCCUUCGGGGAAUAUAAACACCACAUGAGGGUUUCCCGGCACAUUAUCCGCAAGCCUCGGAUUUACGAGUGCAAAACAUGUGGCGCCAUGUUCACCAACUCUGGAAAUUUAAUCGUGCACCUGAGGAGUCUGAACCAUGAAGCAUCAGAGCUAGCAAACUACUUCCAGAGCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-71.90 kcal/mol

Ensemble Metrics

Free Energy: -77.89

Frequency: 0.0001

Diversity: 76.04

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((...........((((((.((((((.((((((....))).))).))).............((((..........))))...)))..)))))).)))(((((...((((((..(((((((............((((((((.......((......))))))))))((.........))..((((((......)))).)).......)))))))))))))))))..((((((((.......(..((..((((.(..((........))..).)))).))..)........))))))))..)

Thermodynamic Ensemble Prediction

(,,...........((((((.((((((.((((({....})).))).))).....,||,...,|,{(.,.{,.....))}}...)))..))))))..,,,(((({{,,(((((,.(((((((.......,,,..{{((({{,.....,.{{......))))))))))||,,.......|...{{((((......)))),))...,,},))))))))}}}}},,)|..((((((((.........{((.,((((.(..((........))..}.)))).),..)},......))))))))..)