Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ZFR_0006100

Sequence Length

266 nt

GC Content

0.3910

GUACGAAAUGAUGAAGGAAAAGUAAUUCGGUUCCAUUGUAAAUUAUGCGAGUGCAGCUUUAAUGAUCCCAAUGCUAAGGAGAUGCACUUAAAAGGGCGAAGACACAGACUUCAAUAUAAAAAAAAAGUAAAUCCAGAUUUGCAAGUAGAAGUAAAGCCUAGUAUUCGAGCAAGAAAGAUUCAAGAAGAGAAAAUGAGGAAGCAAAUGCAGAAGGAGGAGUACUGGCGAAGACGAGAAGAAGAGGAGCGUUGGAGAAUGGAAAUGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-37.60 kcal/mol

Ensemble Metrics

Free Energy: -42.29

Frequency: 0.0005

Diversity: 43.70

Structure Visualization

Structure Prediction

MFE Structure Prediction

.(((.................))).((((.(((((((.(..(((((..((((...))))..))))).((((((((........((.(((...)))))((((.......))))..............((((((....))))))........((...(((.(((((((..(((.......((((...........))))........)))........))))))))))....))............))))))))).))))))).))))

Thermodynamic Ensemble Prediction

.(((.................))).((((.(((((((.{..{,,{({{,{{,,,,,}}},.}}},,.((((((((..,,,..,((.{{,...,},}}((((.......))))..............{{{{{{....}}}}}}........||...(((.(((((((..,(,.......{((,...........,,,,...{{...,))........))))))))))....,}............))))))))}.))))))).))))