Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ZNF609_0000400

Sequence Length

250 nt

GC Content

0.3920

GCGGGUGGAUCAGCUUGAGGUCAGGAGUUGAGAAAGCUGCAGAAAAGGAACCUUAGCUUGUGAGAAGGAAGUUGUACCUGGAAGGAUUUGCCAUCUAUCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAUUACAGGCGUGAGCUACCGUGCCUGGCCAAUUUUUAUAUUUUUAGUAGAGACGGGGUUUCACCAUCUUGGCCAGGCUGGUCUCGAACUCCUGACCUCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-70.20 kcal/mol

Ensemble Metrics

Free Energy: -74.90

Frequency: 0.0005

Diversity: 40.28

Structure Visualization

Structure Prediction

MFE Structure Prediction

((..........))(((((((((((((((((((((((((.((.........))))))))(..(((.(((((((.(.......).))))).)).)))..).........................................................(((....))).(((.(((((((((((((((((.......)))))))..((......))...))))))))))))))))).)))))))))))))))

Thermodynamic Ensemble Prediction

((.{.....,).))(((((((((((((((((({,(((((.{{.........))))))}|(,,({{.(({{{{,.,.}}|.,,,{|}}}}.)).)))..}.....................................................,,,.{((....))),(((.((((((((({,{(((((.......)))))||.,((......)).,,)))))))))))))))))})))))))))))))))