Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ZNF827_0002300

Sequence Length

250 nt

GC Content

0.3800

AUGUUACCUAAUCGGUAACACAUACUUGGGGCACAAACGGAGAGGCCGCUGGUAAAUACGAUUUGAUGAUGACGACUCUGAGAAGACGCUUUAUUUUCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGUGGAGCCAUGAUAAUGUUGAUAGAUGUCAGGAGCAGAGGAUGUCAGUGACUAAUGGGCGUUUAAUGGAAUGCCGGACAAAGGGGUGACUCACGUCCCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-42.53 kcal/mol

Ensemble Metrics

Free Energy: -47.76

Frequency: 0.0002

Diversity: 52.72

Structure Visualization

Structure Prediction

MFE Structure Prediction

.(((((((.....))))))).....(((((((.......(((..(((.((.((................(((((.(((((....((((.(((((((((((...................................................))))).............)))))))))).....)))))..)))))..........(((((((....)))))))..))..)).)))..)))..)))))))

Thermodynamic Ensemble Prediction

.(((((((.....)))))))..,.{({(((((.....,,{{{..(((.{{,||.....,..,,.,....(((((.(((((....{{{(,{((({{,{{{,...................................................})))},{,(,,..}|,..}}}}}})))),....)))))..})))).,..,...|.(((((((....))))))).,,,..}}.)))..))).})))))))