Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr11_0645500

Sequence Length

187 nt

GC Content

0.4385

GUCAGCAUGAUAGAAAGUGUUUGCAUUUGGUUUAUUUUCUAAGCUUUUAAGACAACAUCAGAGAUGAACGCCAAGGAUUUCAAGAGCAGAGGGUAAAAGACAUUCAGAGACAUCACUGGAGUCAGCCUUGUUAUGGGAAGUGCCUUGAAUCCAAGCUUGCUGGGAUGCUUCUCUGGGGGAUCUCGUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-38.40 kcal/mol

Ensemble Metrics

Free Energy: -42.57

Frequency: 0.0011

Diversity: 41.06

Structure Visualization

Structure Prediction

MFE Structure Prediction

((.(((.((.......(((((((..((((((...((.(((.........))).)).))))))..)))))))((((((((((...((((.(((.(....(((.(((((........))))))))).)))))))....))))).)))))....)).))).))((((((.((((...)))).)))))..)

Thermodynamic Ensemble Prediction

((.(((.((.,.....((((({{..{{{(((.,,||,{|||,.......})}.,,.}}}}}},.})))}}}((((((((((..,((((,{((.(....(((.(((((........))))))))}.))))))).,..))))).)))))..,.}}.))).))((((((.((((...)))).)))))..)