Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr11_0656200

Sequence Length

168 nt

GC Content

0.4643

CCACUGAUUUCUUCCCUUCCCUCUCCAGCUUACACCUCUUGUCUUCCUUCUGUCACCUCAAUUUGGGGAGGCUAUAACUUCACCGGGGUUACACACCCAAGACCAGUCCAUUUUAGGAUCCAAGCAAAGUUUCCUGAGUAGCACUCUCUUGAGUGUUUCAUUUAGAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-28.10 kcal/mol

Ensemble Metrics

Free Energy: -32.16

Frequency: 0.0014

Diversity: 38.15

Structure Visualization

Structure Prediction

MFE Structure Prediction

(..(((...................)))............(((((.....(((.(((((.....((((((.......)))).))))))).))).....)))))..((((......)))).........)((((.((((((((((((....)))))))..)))))))))

Thermodynamic Ensemble Prediction

(...,{,............{{{{{{{{{.,..........{,,,......,|..,.......,})))))))......,,,,...|((||......))).,},...{(((......)))}.........)((({{((((((((((((....)))))))..)))))))))