Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr12_0222700

Sequence Length

287 nt

GC Content

0.4843

GUUAGAGAUUUUCUUUAAGGGACCCCGUGUGGCUGCAGCAGGCUUCCAUACUACUUGUGAGCCUCAGCUUCCCUGGUGGGGUGAGACCAAGACUCCCACCUCACACUUCAGAGCCUUCCCCCAGAUUUUCACCUUUCAACCAUAUGCCCUUCUUGGGUGGUCUCCAAUUUAGAGUUUUUUCUACAAUGGUCCAUGCUGCUUUUCGAUUCUCAUUCUUUUCCUGCAUCAUGAUACACUCUCACUCCCUUCAAACUGCUCCACAUGGCCUUCAGCUUCACCUGCUGAAU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-67.00 kcal/mol

Ensemble Metrics

Free Energy: -71.70

Frequency: 0.0005

Diversity: 36.78

Structure Visualization

Structure Prediction

MFE Structure Prediction

.(((((((...)))))))(((...((((((((..((((.((((((.((.......)).))))))..((((....(((((((((.((.......)).)))))))).)....))))........................(((....((((.....)))))))..(((...(((((....)))))...)))..((((.(((.......................))).))))......................)))).)))))))))))(((((.......)))))..

Thermodynamic Ensemble Prediction

.(((((((...))))))){({...((((((((..((((.((((((.((.......)).))))))..(({{....{((((((((.((.......)).)))))))).,....)))}........,{{.............,{{....{{{{.....))))))}..(((.,.(((((....))))).,.)))..((((.(((.....,,................))).))))......................)))).))))))))))|(((((.......))))),.