Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr12_0581800

Sequence Length

740 nt

GC Content

0.3405

GCUAAAUAUUAAUUGUAGUCAGCUUAUUCUCAAAUGUGUUAUUCUCCAGUCCAGUCUCCUAAAUUUCCAGUCCUAAUUUUACCUGUCUAUUCUAGGUAAAAUUCUACCACACUAUUCUAGAGUGGACAAUCUAGAACUAUAACUGAAAACUUGAAACUCAGUAUGUCUAAAAUAAAACACCUUUACUUCCAAACCAUCUCUUCUUCAGUUCCCUAAUUCUGUUAAUGGCACUAAGUAUAUCUCUUCAAUCUCCUAUGUUUCAAACUUCACAAUUAUGUUAGACCUUCUCUGUCAUUUUCCUCCAUCCAUAAAUUAGAGGUCAAGUCUCUAAAUCUCCUCUCCUUUAUAAGCCCAGAGUCACUUCUCUAGUUCAUAUUCUUAUCAUUGUGGGCAACUUCAAUGACUUUCUAAUAAACCUUUUCUCAAUAAGCCUCUCAUCUUCAAAUCUGUACACUGCUGUCAGAAUAAUAUUCUAUAAAGAAUAAUCCUCUCAUGGCAUUGUUCAAACAUCUUCCACGACUACUACUUAUCAAAUAAAUUAUAAAAGUGUUAUCCUACAGUUGAAGACAUCCUGCAAUAUAGCUCUACUUUUCCUGUUUACUUUGUAUAUAUGCACCCUAUAAAUCAAUCAAAUGGAACAAUUCAUUUUUCCUGCGAAAGUAUUCCAUAUUAUCCCCACUUGCUCAUAUUGUUUUUCUUCUCUCCCUUUCAACAAGGUUUACAAGCCCUUCUUCUCUCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-94.40 kcal/mol

Ensemble Metrics

Free Energy: -109.16

Frequency: 0.0000

Diversity: 173.50

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((...........((((((.(((((((.......(((((........(((((.(((............((...(((((((((((.......)))))))))))..))...........))).)))))....((((..((((.((((...........))))))))))))......)))))...(((((.....((((........(((..........)))...))))....)))))......................................(((((((........((((((...........(((((..(((((................)))))..)))))......((((......)))).(((((((..........)))))))......))))))..)))))))...........)))))))................((.(((.((((((.(((....((((((....))))))....))).)))))).))).))............)))))).....................((.(((......))).))(((((......((((((((((....................((((....)))).................((((((...(((...........)))....)))))).............))).)))))))...)))))....((((.....))))......)))(............)

Thermodynamic Ensemble Prediction

(((...........((((((.(((((((...,{,.(,{(({{{.....(((((.(((....,,,.....{{...(((((((((((......,})))))))))}..,,......,,,..))).)))))....{||||.{{,,|{(((,...,,{{,,,,,|||,,||,,,..............||{{,.....,,,,.......,|{{,....,....}})..,}})).,,.}}},,...................||},,,,.....,.....,|{,|{((.....,,}},}}|............(((((..(((((................)))))..))))}..{,..((((......)))},|||,.,,......,{{{|{,||,,..}}.}))))),.....}}}},,,..,,....)))))))................((.(((.((((((.(((....((((((....)))))).,..))).)))))).))).)}............))))))...,,................{{.(((....,,}}},}|(((((......((((((((((............{,.,,..,((({....,},,...,,},........,,(((((,...,}},}}|,,...,.}}}}}}},,,,},.............))).)))))))...}}}))....{{{{.....})))......)))(............)