Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr12_0582300

Sequence Length

401 nt

GC Content

0.4439

GUGUAUCUCCUUCACUGUUGACAGCCCCUACAUGUGCUCCUUGACCAAUCAAAAACCUGUAAAACCAAAGGAAAAAUAGUUAAGCAAAAGAUAUUAUCAUUGAAAUAAAACUAAAUGCAUAACCAAUGAGGAAAGUUCCUAUAUAAAGCAGCAAUAAAGGGCAGUAUAUACAUUAUUUAAAUUUUAAAAAACUAUCAGGCCAGGCGCAGUGGCUCACGCCUGUAAUCCCAGCACUUUGGGAGGCCAAGGCAGGCGGAUCACGAGGUCAGAUCAAGACCAUCCUAACACGGUGAAACCCUGUCUCUACUAAAAAUACAAAAAAUUAGCCGGGCGUGGUGGUGGGCGCCUGUAGUCCCAGCUACUCAGGAGGCUGAGGCAGGAGAAUGGCAAGAACCCGGGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-96.60 kcal/mol

Ensemble Metrics

Free Energy: -102.83

Frequency: 0.0000

Diversity: 90.05

Structure Visualization

Structure Prediction

MFE Structure Prediction

(.((.((((((((.(((((..((((((((....((((((((((((..........(((..........))).......))))))............((((((.....................))))))(((....)))((((((..((..(......).))..))))))....................(((((((.(((.(((...((((.((.(((((((..((((((....)))))).......)))))))))))))((((((.......)))).))...(((.(((...))).)))........................))).))).)))))))))))))..(((((....)))))..))).))))).)))))..))).))..))))))(....)

Thermodynamic Ensemble Prediction

(.((.((((((((.(((((..((((((((..,.(((((({((({....}}},...(((..........))).......((({.{{{..,,.,.{{,{,.,,,..}}}...,,...})}.}}}}..,,,((((....)))){{{{{..((..{......,.)).,)}))},.....,,,,.....,,,...(((((((.(((.(((...((((.((.(((((((..((((({....})))))......,|}})))|}}||||({((((.......)))).}}...,{{.{||,,.,))}))),,......................))).))).))))))))))))).,||{|{,,..}}}}}..})).))))).)))))..))).))..})))))(....)