Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr12_0583200

Sequence Length

374 nt

GC Content

0.3503

CUGUGAAAAUAAAUGUGGGAAGAAAAUGUCAAUUUGGGAAUUAUCUGCAUUGAGGUAAUAAAACAAUGGGACUUGAAAUCAUUCAGGGAAAGAGUGUAGAGAAGUGAUUUUGAAAACAGUAAGGAAAGGGGUAAGAUUAAAUUAUGAUCAGGAUAUUGUGCUUGGAAAACAGACAUUUGUGAUACCUUAGUCAGUAAACAGCUAGAAAUAGAAAGUUCAAGACACCAUCUAGUACAGAAGACAAAUACAAAAAUAGAUGAUUAUAUCAAAAGGAAUAUGGUAAGACAAUUUCAGACACGUCCACUGGUUUUUAUGAGAGCUGAGAAAAGGAGAACUAAGAAGGAAUGGUGGUCGUCAGGGAAUAUUUCCUGGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-55.60 kcal/mol

Ensemble Metrics

Free Energy: -63.19

Frequency: 0.0000

Diversity: 107.00

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((((((....(((((..((((.((((.........(((((((......)))))))...(((......((((((....)))))).......)))......(((.(((((((....................(((((.....))))).(..(((((.(((.((...((((....))))....))..))))))))..)..(((....)))....))))))))))((((((......................))))))(((((((........)))))))..)))).)))).......)))))..))))))))...))((........((..((((........))))..)).(((((((....)))))))))

Thermodynamic Ensemble Prediction

((((.....,...,,,((,....(({((((..,{(,,.,(((((((,,{{,.}}}}}},....||,.....((((({..,,|||}}}.....}}))},,,.,,|}|,||||,|,.,{,,{,.........{{,.,{{{,..,,.)}}}}....}}}}|}.,}||,....}})}))))).,..,.))},,,},.,,..))))((.,,,........|}}..,,,..((((((......................)))))),{{{{{{,....,|{||}||}}....}},})))....{((.(((((,.(((((...((..((.........))..))...))))).}))))).))}((((((....)))))).))