Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr13_0100600

Sequence Length

251 nt

GC Content

0.3586

GUUCAUUAACAGUGUUUAAGAAAAAGACAAAAUGUUCUCAUGUACAAAUUGAACUGCCUAUCAGAUUAUUUUAAGAUCUAGUUCUCCAGAAUUCCCAAGAAAGUAGGACUCCUAUUUGGUUUAGAAACGCUCAAUAUACUAAGAAACAAAACAGGGACAUCUGGCACCGGCUCUAUUCGUAAAGGCAACAUUCUCUAACAGAUUACGCUCACAUUCAAUUGUAAACUCCACUAACAACUAACAAGCUUCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-25.10 kcal/mol

Ensemble Metrics

Free Energy: -32.33

Frequency: 0.0000

Diversity: 54.94

Structure Visualization

Structure Prediction

MFE Structure Prediction

.(((.((((......)))))))...((......((((.............))))(((((......((((....(((.((.((...(((((..((((....(((((((...)))))))..(((((..............)))))..........))))..))))).)).)).)))....)))))))))....(((.....)))........(((......))).........................))..

Thermodynamic Ensemble Prediction

,(((.((((......))))}}}...{{,....|{{|,...,.,{{,,,{{|||.(((((....(({{......{{|,||.((...(((((..((((....{((((((...))))))}{((,{,,..............}},............))))..))))).}}.)).)}}..,,,.,.)))))....,,{.....}}}............,,,,}))),.....................,.....,