Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr13_0260000

Sequence Length

284 nt

GC Content

0.4085

GUGCAUUCAGCAUUAUUACCUGUCCUGCAGCAUUUCCUUAAACGUCUUAGAGCUUCUCUUAGACUUCUCAAGUGCCUGCUUUUCAAUUUCUUCUCUCUCUUCUUUUUUCUUCUGCAGAUCUGAAGUGUAACUUUUUCGACGAUCUUUCCAUUUUGCAAGGUCCUGACAGAAAAAUCACAUCAGCAGGGGCACACCUGAAUUUCUAUACACCCUUUCUAGCAGACAGAAUGUGCCAGAGUAUCUUAUUACAUCACUGAAACUAUUCACUCCAACUGGAUGCCAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-49.20 kcal/mol

Ensemble Metrics

Free Energy: -54.79

Frequency: 0.0001

Diversity: 61.84

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((((.(((........)))...(((((((((........((((.((((...)))).)))).....))))).))))...............................((((((((.((((.(((....((((((...((((((.(......).))))))......)))))).))).))))((((......)))).................))).)))))..))))))))(...((((((...........((((....))))........))))))...)

Thermodynamic Ensemble Prediction

,.((((((((..........{{,...(((((((((........((((.((((...)))).)))),,...)))))}})))....,......................,,,,((((((((.((((.(((....{(((((,..((((((.{......).)))))).,},.,)))},..))).))))((((......)))).................}}).))))).))))}}}}}|.||(((,,....,,,.....((({....})))......})))))))....