Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr16_0035900

Sequence Length

252 nt

GC Content

0.4365

UUCUGAAAUCAUAGAUUCAUGCUUGUUUUUCAGCUUGGUAAGAUUCUUGGCCUUUUCUUCCUCUUCUGCAAGAUUUGUCGUUAAGUCACUAAUCCUCUCCUCAAGGAGUUUUCGUUCUUUUGAUAGUUUAUUGUUCUGAUCAUCCAUGACCAGGAUCUCAUCCUCCAGUUUCUUGAUCUUGGCCUCAGCCGUGACCUUCUCAAGUUGCAGCUUCUGCCUGGCAGCUUCCUCCUCCUCCAGCUGUUCUUCAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-45.40 kcal/mol

Ensemble Metrics

Free Energy: -51.55

Frequency: 0.0000

Diversity: 58.82

Structure Visualization

Structure Prediction

MFE Structure Prediction

(..((((........)))).)((((.....(((((.((..........(((....((((.(......).))))...))).....(((((.......((((....))))...(((......)))..............(((((.....(((.(((((...)))))...)))...)))))..(((....))))))))......(((((((.((....))...))))))).........))))))).....))))

Thermodynamic Ensemble Prediction

(..((((,{{...}})))).)((((.....(((({,((..,(,..,,{(({....{{{{.{......},))))..,||||..{{({{((.......(({{....))))...,.,..|,..})),}}......,....({(((.....{{{,(((((...,}}}}...},,...))))).,(((....))))))),......(((((((,((....)).,.))))))).........))))))).....))))