Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr16_0036500

Sequence Length

441 nt

GC Content

0.5215

GAUUACUGAGAGGCAGUCUGGAGCUGUGGCAGCCAUCUUGCCCCCGUGAGGGGAGAGCCUGCUUGAGAAUGGAGCCAAUAUGGAGGAAGGCAGAGAGAGAGAGAGAACGAUGGCGGGAGAUCAGACCCUGCCUACGGGAUCCAGCUACAUGUCUGGCCUUCUCAGUUCCAGAAACCAAUGCAUUUCCUGUUGGAUUUCUGUCUCUUAUACCCUCAAUGAUCCACCCUUAACUAGACAGCCUCCUACCCUACAGUAGCCAUCUACAUGCCUUUCUCCAAAAUCAUGACUCCUCCAAGAAAAAGCCCAUCUCAGACAACCAAGACCAUGGCUCUUAGGAUCCCACCGAGCUGUACCUCAAAGAUCUCAAAUCCAGCUAUAUCCAGGAUCCCCAGGAAGGAAGCCCCUUGCCGAUGGGUCUUGUCCAGGGCUUUGUUCACGCGG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-124.80 kcal/mol

Ensemble Metrics

Free Energy: -134.70

Frequency: 0.0000

Diversity: 147.74

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((.(((.((...((.(((((..((.(((((.....)))))(((....)))(((((((((.((((((.(((.((.....((((((((((((((((((((((.(((.((..((((((.(......)))))))..)).((((((((...((((.(((..((((.......)))).)))..)))).....))))))))))).))))))....................................((((......))))...))).).))))))))))))...((.((.......)).))....))))))))))).))...........))))))).(((((.....(((......)))...)))))))..)))))))...)))))))))(((..(((.((((((((..(((....)).)..)....))))))).)))..).))

Thermodynamic Ensemble Prediction

((((.((({(({.{(({((((,..((,(((((...{{{,,|((((....))))||||,|||}|(((({,(((.((.....(((((((((((({{({((((((((({.{,..((((((.{......}))))))..|{(((.(((((.....|{||||..,|||,.,..,|||||,|||,,}},..,,,}))))).))))),)))))).....,,,.................{{{,..{,...{{{{......)}}),..}))},.))))))))))))...,,.||..,,...}}.),....))))))))))},)}.}}.,}}}..}),)))))}|||||{{.,.((({,,...,,}...|||,.....}}}||||...,,|||||||(,..{((({(,,,,,|}}},||...})))}}})....}))))}},)))..}.))