Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr16_0039600

Sequence Length

299 nt

GC Content

0.4983

GAUCACUUGAGGCCAGAAGUUCGAGCAGAGCCAGGGCAAAAAAGCAAGGCUGUGUCUCUACAAAAUUUUUUAAAAAAUAAGCCAGGUGGCUGGGCUCAAUGGCUCAUGCCUGUAAUCCCAGCAUGUUGGGAGGCCAAGGCAGGUGGAUCUCCUGAAGUCAGGAGUUCAAGACCAGCCUGUCUGACAGGGCAAAACCCUGUCUCUACUAAAAAUACAAAAAUUAGCCGGGUGUGGUGGCAUGUGCCUGUAGUCCCAGCUACUAGGGAGGCUGAAGUAGGAGAAUCACUUUAACCCGGGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-99.50 kcal/mol

Ensemble Metrics

Free Energy: -106.44

Frequency: 0.0000

Diversity: 50.83

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((((..((((....((..(((((.((((...((......))..)))).)).))).))....................((.((((((((((((((..(((.((((((..((..(((.((....(((....)))((((((((((..((((((....)))))).......))).)))))))(((((((.....)))))))......................)).)))..))..)))))).))))).)).))))))))))..)).)))).))))....).))).((((......))))

Thermodynamic Ensemble Prediction

(((({(((..((((....{{..(((((.((((...((......))..)))).)).))).,,...,,{{,.....,,,,...((.((((((((((((,{..(((.((((((.,,..{((({{....,})))}.,|},(((({((({({.((((((....)))))).}}...,)).})))))))(((((((.....)))))))......................||{|,,..))}})))))).))),,.)).)))))))))).,)}.)))).}))).,,.}.,)).((({......))))