Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr16_0071100

Sequence Length

225 nt

GC Content

0.3956

GUAACUCUGAACAAAGACAGCCUGGAGUGAUUCGCAUAAUUUCUCUCUGUUGCACACAUACCACAUCUCAUGAUACUCUGAGAAUAAUCAUUUCGUAUACUCAUAUAACCUAUAAAAUAUAAAGUACUUCUUCAGACAUGACUUCUCAUUUAAUUCUCUUACAGCCCUCAAGGUAGGUAGAGUGGGUGAGGGAAGGGUGGAGAGGCUUUUGGGUCAUUCAGCUUA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-35.40 kcal/mol

Ensemble Metrics

Free Energy: -42.66

Frequency: 0.0000

Diversity: 76.62

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((......))).(((...((((((((((.....(((((((((.((.(..............(((((....((((((((.....((((.((((..................)))).))))..))).))))))))))...((((((((...((((..(.(((.....))).)..))))))))))))).)).)).)))))))....)))))))))).)))..

Thermodynamic Ensemble Prediction

{....{{(......}}}.{({,{,((((((((((...,,..(((((({.,,.,.......,,...,,((({(....{{(((({{.....,,,,.{{{(.....{{,....,,....,}}}.,}}},.}}}||}}))}}))}.{{(((((((,.{{(((({((.,{{.....})),)}.)))))))))))))},,}})})))))))..,,)))))))))),)))..