Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr16_0275900

Sequence Length

186 nt

GC Content

0.5108

GUGGAAAUGACGCUGGAUCACACAAACUGUGACAUAUUAAGGAUGAAGGUGCAGAAAGACCCCCCUGGCCCGUACUUUGUGCUUGAGUUGAGUGCUGUCCAGAAUGCAUUCUGGUGGCUGGAGACGGUGAUGAGGCAGUUCCUGAGCUAGGAGAUUGGUAAGGCAUAGGCUGAAGCUGAGGAGAUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-42.50 kcal/mol

Ensemble Metrics

Free Energy: -46.71

Frequency: 0.0011

Diversity: 46.10

Structure Visualization

Structure Prediction

MFE Structure Prediction

.(....((..(((((..((.((((...)))).((..(((((.((.(((((((.(..((......))..)..))))))))).)))))..))...((((.((((((....))))))))))..))..)))))))..).((.(((((.((((.((....((......))....))..)))).))))).))

Thermodynamic Ensemble Prediction

,(....,,..||(((..((,(({....}))).((..(((((.(({(((((((.(..((......))..}..))))))))).)))))..)).,,(({|,{{{{{,..,,))||}||,||{{,,..)))),)).,).{{.{((((.((((.((....((......))....))..)))).))))}.))