Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr16_0403600

Sequence Length

350 nt

GC Content

0.6000

GAAGCCGAGGCGGGAAGAUCGGUUGACUCCAAGAGUUCAAGAGCAUCCUGGGAAUGACAGGGAGACCCCGCCUCUAGAAAAACAUUUAAAAAUUGCUGCGUAUGGUGCCGCACACCAGCAGAGUCCCAGCUACUCGGGAGGCUGAGGUGGGAGGAUUGGUUGAGCCUGGGAGUUCAAGCCUUGAGUGAGCUGUGGGUGGGGGGGGCAGCACUGCAGGGUGAGGUGAAGGGGGUGGUUCUGCGGGAGGAGGUGAGGUGGCUCUGCGAGGUUAGGAGAGGGGGCAGGGGCUCUGUGGGGUGAGAUAGGGGGUAUCUGCAGGGUGAGGUGAGGGGACAGCUCUGUGGGAUGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-110.70 kcal/mol

Ensemble Metrics

Free Energy: -118.05

Frequency: 0.0000

Diversity: 118.95

Structure Visualization

Structure Prediction

MFE Structure Prediction

..((((((..........))))))..(((.....((((.(((((..((((.......))))....(((((((((.....................(((((.(((.(.((...((((.((((((((((.(((((((...(((((.((.(((.....))).)).)))))..)))).....((((.(.(..(((.((((((..(....)..)))).)).)))..).).)))).......(((.(....).)))........((((.(.......).))))..))).))))))))))..)))).....)).).))).)))))...)))))).)))....)))))...)))))))

Thermodynamic Ensemble Prediction

..((((((..,.....,.))))))..(((.....{(((,{((((.{((((.......))))|...(((((((((,,,,......,},......{.(((((.,{(,({((.(.((((.((((((((((.(((((((...(((((,((.(,,.,,,.||,.}}.)})))..,},)||..|||||||||..(((|(,,,|,......))},)}||{|||||}..}.}.,,,,.,.}.,}}|}}|,,..,,,},,,...,..||||.|....,..).)}})..))).))))))))))..)))).....,).),)))}))))).},)))))).)))....))))).}})},,)))