Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr17_0444500

Sequence Length

174 nt

GC Content

0.5287

GUUGGGGAAUAAGUAGGAGAUGUUGGGGAGUAUUUUGGGGUGGUGGGUGAAUAGGUGGGACUGGUAGGCGAGUACUUGGGAGAGGUGGGUGAAUAUUUGGGACUGGUAGGUGAGUACUUGGGAGAGGUUGGGGUAUACUCUGGGGAGCUGGGACUGUAAGAAGGACUGGUUGGG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-27.10 kcal/mol

Ensemble Metrics

Free Energy: -29.84

Frequency: 0.0117

Diversity: 22.87

Structure Visualization

Structure Prediction

MFE Structure Prediction

.((((((....(((...(((((((.(..(.(.((((.(((((.(.(.(...(((......)))...).).).))))).)))).).)...).)))))))...))).........((((((.((.....)).)))))).))))))..((((((..((......))..))))))...

Thermodynamic Ensemble Prediction

.({{{{{....(((...(((((((.(..,.{.((((.(((((.(.(.(...(((......)))...).).).))))).)))).,.,...).)))))))...)))..,......{(((((.({.....}}.)))))).))))}}..((((((..((......))..))))))...