Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr18_0229400

Sequence Length

242 nt

GC Content

0.3140

GUCUUUAAGGCUUAGCAUUCGUUCAAAACUUGUCUGCAUUAAAUCAUCAUUCACUAACCUCUUUUCUUUAGGUCGGGUAUCUUUUGAUGCUGGUGAUGACUUAGGUUUAGGCUUAUCUGCUUCAGAUUUUAGUUUGAGUAAGCUAUUUAUUUGAAUUUUAUCUUUAUGUUUGUCUCGUUCUUUGUAUCUAUCUAUAUCUUUAUCUUUUUUAUCUUUUUCUUUUCCAUCUGGAGUUUUCAAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-29.90 kcal/mol

Ensemble Metrics

Free Energy: -35.65

Frequency: 0.0001

Diversity: 72.65

Structure Visualization

Structure Prediction

MFE Structure Prediction

((....((((....(((..((.........))..))).....(((((((....((.((((.........)))).))(((((....))))))))))))((((.((((((((((......)))).)))))).)))).((((((((........................))))).)))..........................))))....))((((.....((((....)))).....))))

Thermodynamic Ensemble Prediction

((....,(({|..,(((..,{,........,|,,||}.{{{{.(((((({,..{{.((((.........)))).}|(((((....))))))}))))))).}}}}||,}||||......|}|||||||...{{||((((((({{.....,,,}}},,.........,,))}}).)}}}..,,.,{,|......,},,.......,,,....}}{{{{.....((((....)))).....})))