Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr19_0045600

Sequence Length

250 nt

GC Content

0.4840

GAGUCAAGGCGGCGCCGUCUGGGGCAGUGCUGGUGGAUUUGGAAUCAGGCAUAGGAAGGGGCACAGGUCUGGCCACUGGAGGCGGCGGCGGUAGCAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACAAACUGCACAAACUCCUUCAGUGAGUCCUGCCCGUGGUGGUGGUGGUAGCGGAUGGUCGGGUGCGUGAAAUACGGGCUCGACUGCUGGAUGAUGGAC

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-65.00 kcal/mol

Ensemble Metrics

Free Energy: -68.56

Frequency: 0.0031

Diversity: 41.29

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((..(.((((((.(((...))).)))))).).)))))(..((((..(((....(.(((((..((.((...(((((((((.(...(((((...............................................................))))).....).))))))))))).))))))).)....))).......(((.(((((((((.((((...)))).))))))))))))..))))...)

Thermodynamic Ensemble Prediction

(((((..{.((((((,(((...))).}))))}.|.)))))(..((({,.({{....{.((((..,((.{{..,(((((((((.(..,(((((...............................................................))))).,...).)))))))))}),))))))).}..,.))).}..,.,(({.{((((((((.((((...)))).))))))))))))..))))...)