Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr19_0222200

Sequence Length

250 nt

GC Content

0.4000

ACUCAUCAGCACUUCUAACAACACAGCUCUAAGCAAUCUGGCUGUGCCCAUCUCUUCCACGGGCUCCGCUCUGACCACUCGGGCCUUUCUGCUCCUCGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCUCAGGCAAUAAAUUAUUGUUGAGACUCCAGAACAGAUCUCACCUUCCCCUCAAAAAGUGAAUUUAUGCCAACUAUCGCAACCUGUCCAUCCUGCAGUAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-29.60 kcal/mol

Ensemble Metrics

Free Energy: -34.33

Frequency: 0.0005

Diversity: 55.35

Structure Visualization

Structure Prediction

MFE Structure Prediction

(.....................((((((...........))))))((((...........))))...((.((((....))))))...)(((((...((((..................................................(((((.(((((...))))))))))......(.((((...((((.((........)).)))).....(((........)))..)))).)..)))).)))))

Thermodynamic Ensemble Prediction

{....................{((((({...........))))))|(((...........||||...({,{{{,....,)))))...,{{|{{...{|||..................................................{{{{(((((((...|}}}}}||||......,...,{...{{{{.,,.........,,)))).,,,,|||,.......|||..,,},....,,)),}))))