Sequence Details

BLAST PRIMER
Symbol
hsa_chr1_0162000
Sequence Length
399 nt
GC Content
0.3383
GUAACCUUGGGUAGGUUGGUUAAAAUUUCUCUAGAGCAGACUGGCUACCUUAUCUAUAAAAUGUGGAAGUAACAACAUGUACUUCCUAAGGUUGUUAUGAGAAUUCAACAAGUUACGUAUAGGCUUAAUCUAUAAUAAAUGCUCUACUUAAUCUACAAUAAAUGCCUAUAAAUUCUAGCAAUUAUUAUCAAUGUGAAUUAUGAAAUGCCAUCUACAGGACAGGAAGGGUCGGGGAAAUGAGAGGUACAACAGAAAGAGAAAAGGAAAAGAGUUGAGACUGGUUUACUGAAACAAAAGGAAAUGAACAUUAAGUUACAGGAAAAUUUCAAGGGAGAGAAAAGGUAGUCACUGAUUCAUAAUAUACUGAAGAAUUCUGAGAAAAGAUACUUCUAUGUUAGG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-60.82 kcal/mol
Ensemble Metrics
Free Energy: -71.34
Frequency: 0.0000
Diversity: 100.84
Structure Visualization
Structure Prediction
MFE Structure Prediction
....(((.(.(((((..(((.....((((((.(((((((..((((((((((.(((.........(((((((........)))))))...(((((((...((((((............(((((((.......................................))))))))))))))))))))......................((((.(((.((...(..((....))..)....))))))))).........((((.........((.((((...(.(((..((........))..))).)...)))).)).........)))).......))).))))))))))))).((((........))))...))))))))))....)))))))).).)))
Thermodynamic Ensemble Prediction
....(((.(.(((((..(((.....((((((.((({(((..((((((((((.(((.........(((((({,(,...,))))))))..{(,((({,,{(,.,,,|}}}},},}}...{{{{{{|,...,}}}},......{((({.(({..(((........((({{.....{{{{.|||.||,|,.{{,.{,||,.,,,||...,{{(.{{{.,,.,,,.,|}...})}..)}},.},,,))))).........,},,..}}}...}}))){{{{,.,.{((,.(({.{{{...,|........}.,,..))).))}..,..}}}},......))).))))))))))))).{(((........)))}...})))))))))....)))))))).).)))
Back