Sequence Details

BLAST PRIMER
Symbol
hsa_chr1_0716800
Sequence Length
492 nt
GC Content
0.3557
GUAUGCAGUUCUAUUCAUUUAAACAUUCCACCUUUUUCUGAGUAUCACAUAUGUCAAGACAGUCAUUGCAAAAACAUUUGCAAGCUGCAUGUGGAAUGUGGCAAAAUUCCUUUUUAAAAAAACCGAUAGUGUUUAAAUCCUAUCCCAACUCUCAGAGACUUUUCUUAUUUCAUAAUGCCCCCCUACUCCUACAACUCCCAAAAUUACUCUAAUUUAUUCACAUAACUCUCUGCUAACUUUAAGUUUUUUGUAUCAAUUCCCUAACAAAACAUUCCAAAUUGUUCUAUCUUUUAUUCAUCUCAUCGAGUUCCACACCAAGUCUUCCUCCAACUGGAGUCACACCCCAAUUUCUCACUCCUCAGUUCAACUUUAGUUUUCCUGACUACCAAUUCCAAUUGCUAAGAAAUGAGAAGUAUAUUUUGAGUAAACUAAAUUACAUACUCAAAUCACUGUUGAGUGUAUCAGUGAAGGUAAUGCUGGCUGCUGAGAGAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-67.00 kcal/mol
Ensemble Metrics
Free Energy: -79.83
Frequency: 0.0000
Diversity: 119.45
Structure Visualization
Structure Prediction
MFE Structure Prediction
(...(((...............(((((((((.....(((((((((...)))).)).)))((((..(((((((....)))))))))))...))))))))).........................(((((.(.......))))))..........((((....)))).........)))...)((.(((...((.(..(((..((((((........(((((...((((.......(((((..((((((((...(((((.........((((........)))).....................(((....((.....))....))).(((((((((................)))))..))))......(((((.....)))))........))))).))))))))..))))).......))))............((((((((.......))))))))....)))))))))))..)))..).)).)))))
Thermodynamic Ensemble Prediction
(,..({{,,.............(((((((((.....{{((({{{{...,}}}.}},,|,((((..(((((({....})))))))))),..))))))))){{,,........,,,..........(((((.(.......,))))).........,(({{....}}}|.........}))...}{{.{{,...{{.{..{{{..(((({,.,.,,,,.....,..,,{,,...,...,,,...}}},.,{(({............}}}}|{((........))),.........,,,,........)))}..........|,....((((....))))..........((((((((.{.{{{((({......(((((.....)))))........}))))...})...))))))))....{(((((((............)))))))}{(((({.,|,,.,,,.})))))}))))))..)))..).))})))))
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