Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr1_0855300

Sequence Length

275 nt

GC Content

0.4509

GAUGUAAAGAGCAUUAUUUGGUCAACUGAUGAAAUUUUAAUGAGGCGUGAGCUUGGAUAGCAGUAUUAUAUCAAUGUUUGUUUGCUUGUUUGUUUGUUUGCUUGAGACAGGUUUGCUCUGUUGCCCAGGCUGGAGUGUAGUGGUGUGAUCUCGGCUCACUGCAACCUCCACCUCCCGGGUUCAAGUGAUUCUCAUACCUCAGCCACUUGAAUAGCUGGGAUUACAGGCACCUGCCACCACACCUGGCUACUUUUUGUACUUUUAGUGGAGAUGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-71.30 kcal/mol

Ensemble Metrics

Free Energy: -76.80

Frequency: 0.0001

Diversity: 100.39

Structure Visualization

Structure Prediction

MFE Structure Prediction

(.(((...(((.(((((((((((....)))............(((.(((((((((...(((((....(((.(((.((......)))))..)))....))))).....))))))))))))...(((((((.(((((((((((((.((.......))))))))))..))))))))...)))).)))))))).)))))))((((.(((((.(((((((((((......(((....)))......))))))))..........))).)))))...))))

Thermodynamic Ensemble Prediction

(,(({...(({,((((((({(((....}}}.}}},....,,.{((,((((((({({,{(((((....{{{.{,,.{{......))}}},,}}}....}}}}}..},,))))),}}}})}}},|({{|((.(((((((((((((,{{......,))})))))))..)))))}}|,|.)))}|}}}))}}}.}}))),)((((.(((({,{({((((((((......(((....)))......))))))))..........}}}.)))))...))))