Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr1_0857000

Sequence Length

158 nt

GC Content

0.4114

UACCUUUGCAAUUGAUUUCUUCCACCAGAGUUCCCUUACUUGCCCAGUCAUCUAGUAGACUCUUCAGGUGUUCAAUCUGCUUUUCUAACUCUUUAGCACUCAUAGAAGUUUCCGUAGGUGGAAUACUCCCUUCAGUUUCUUUCAACCAUUUCUGGAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-18.50 kcal/mol

Ensemble Metrics

Free Energy: -22.41

Frequency: 0.0018

Diversity: 50.45

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((.((..((....((((((((((.(((...((((((...((((........))))...)))))).......((((.............))))......))).))).....)))))))...))..)))))...((((((........))))))

Thermodynamic Ensemble Prediction

.....,,{.,{..({....((((((({((({,....{((({{...{{{{....,,..)))),,.||||||....|||||{,.....{,,,.,.,|,......,})}))},......))))))).,.},...,})),..((((((........))))))