Sequence Details

BLAST PRIMER
Symbol
hsa_chr20_0113600
Sequence Length
328 nt
GC Content
0.4939
GUGAAGAAACAAGCCCAGAGAGGUUAAGUACCUUGUCCAAGGUCUCACAGCUCUAGCUGGCAGCCCAGGAACUGAACCCCAGCAGUCCAACUCUACAGAGAUGCUCUUAACUAUAGCUUCCAGGAACCAAAUUCAACUUAAUAGCAGAGAUAGAAGGAGCUCCCUCCUGCUGACAAACAAAUGAGGAAUCUGCAGGCCAGAGAAGGGAAGGGUCUUGCCUGAGGCCACCCAACAACUCAGCGACAUAAAAUGGUGAGAAGCCAGCAGUUCCAGCUCCUCCAUCCUUUGGCUUUCAGGACAUCUGGGUCCCAAAAAGAAACUAUAGGAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-76.00 kcal/mol
Ensemble Metrics
Free Energy: -83.22
Frequency: 0.0000
Diversity: 107.08
Structure Visualization
Structure Prediction
MFE Structure Prediction
((..........((((((((((((.....))))).(((..((.((..((((....))))..))))..))).........((((((............(((..((((((..((((.(((...(((............)))...)))....)))).))))))...)))))))))............((((.((((.(((.......(((...((((((....)))))).))).....((((.((........)).))))..))).))))))))...(((((((.....))).....))))..)))))))...........))(......)
Thermodynamic Ensemble Prediction
((..........((((((({((((.....))))|,{{{..((,({..((((....)))),.})}),.((|,(((........))))))..{((....}}}..{({{{,..{{{{,||{,,..{(,,,,........||....|||{{,{||,|.||||||{.,{{{,{{,,,.....,....,,||,,.((({,(((,,,,,..{((..,((({({,.,.}})))}.))).....((((.({........}).))))..))),))}),,,,}))))))},,},})))))))}.,,))}}.})))))).,.........}){...,..)
Back