Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr20_0185600

Sequence Length

164 nt

GC Content

0.4756

GUCUCGCACCUUCCGCCCCACAGACUCAGCAUAGUCUUUUGUCUGUUUGUUGACCACAAUCACAGAACAAUCAACGGGCCUUUCGGCAUCAAAGCGUCUCUGGAUUUCCUCAAAAUAUUGACGAUAAAGCUCUUCUCUACGCCGUUCCUCACGUUUCAAACGCU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-20.10 kcal/mol

Ensemble Metrics

Free Energy: -23.85

Frequency: 0.0023

Diversity: 36.39

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....((.......((((...(((((......))))).((((((((..((((....)))).)))).)))).....))))......)).....(((((...((((..((.((((....)))).))....((..........))(((.....))).)))).)))))

Thermodynamic Ensemble Prediction

.....((.......((((...(((((......))))).{(((((((,,(({{....)))}.))))}}))}.....)))).....})).....(((((...{(({..{{.((({....}))).)}....{,..........},{{{.....})).}}}}.)))))