Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr21_0025800

Sequence Length

424 nt

GC Content

0.3797

GCAAGAGAAGCAGCUGAACUCCCACGUUCACAUGAAGCAUCCCCCAUCGAUUCUUAAAGCAUAUGUAAAGUAGGACUUAAUUGGGUCACAAACCACAAGAAUAAUAUACAACUGGCUAAGGGGCUAUGUGAUAAAUAAUCAGGAGAGAAUCUAUUCAUGCACUAGUUUGAUACAGCUAAAUUCUUUACAGUACACAAAACCCAUUAAUAAUGUAGUAUAGAGACCAAAAUGUAAAGAGAGAUAGAAUACAUUACUGAUGUGUGGAUUAAUUCAAGUUCAGGCAUCUACUUGUGUUACAGCACAGCUGUCAAAAGGCGAUAAUGAGUAAAUCAUAAAACGGGUUUGUUUCUUCCCACAUUAUUCUAUAAAUGGACACCGAUGGGUAGUGAAGCAAUGGUUUUGCUGUCCAACUUCAGAGGCUGCU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-86.00 kcal/mol

Ensemble Metrics

Free Energy: -94.74

Frequency: 0.0000

Diversity: 108.01

Structure Visualization

Structure Prediction

MFE Structure Prediction

........(((((((((((......))))....((((((..(((....(((((((..............(((........((((((.....))).)))........)))...(((((....)))))(.((((.....)))).).)))))))(((((((......((((...((((((....(((((((((((((((..............))).))))...........)))))))).......((((((.....(((((.((((((......)))))).)))))....)))))).......))))))....))))....)))))))...........)))..))))))............(((.....((((((((....)))((((((((....))))))))))))).....))))))))))

Thermodynamic Ensemble Prediction

........(((((((((((......)))),..,((((((..{((,,,,({{((({...,,....||...{{{,{{,,{..{((((,.,,,,|||.,,,........,,|...(((((....))))),}|{{{.....}}},.,.}}}}})){(((((({{.{{..((((,.,(((((...,(((((((({((((,,..............})),))})...........)))))))),......{{{{{{.....(((((.((((((......)))))).)))))....}||||}...}},,)))))))))}}})),...})))))}..,,.......))),,)))}}}..,|}}.,||,,|||,,...})}}...}}}||||{((((((((....)))))))))}}},.},,,,..}))))))