Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr22_0220900

Sequence Length

250 nt

GC Content

0.3680

GUGUGAACCACCAUGCCCGGACUCUAGAAUCUUUUACUAUUUAUCAUUGUCCCUCUAAGCUUCAAGUUACUUGAGGGUGAGGACCUUUUCUUCCCCUUCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUAAAUGACUCAAGACGAAGAUGGACAACACAAUAAAAAAUAAGUUGAUCAGCCGGGCACGGUAGCUUACGCCUGUAAUCCCAGCACUUUGGGAGGCCGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-53.80 kcal/mol

Ensemble Metrics

Free Energy: -58.23

Frequency: 0.0008

Diversity: 25.80

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((.(.(((.(((((((.((....((.(((.............((((((.(((..((((((((...))))((((.(((((.....)))))))))...............................................................))).)..))).)))))).............)))))....))))))))).))).).))))))((....((((((....)))))).....))

Thermodynamic Ensemble Prediction

((((((.(.(((.(((((((.((...{{,,(,({{,...{(({{..((((((.(((.,(((,,,||,,..,}|((((.(((((.....))))))))),...............................................................,,.,..))).))))))....}))}}...,)))..,,},))))))))).))).).))))))((,...((((({....}))))).....))