Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr2_0151000

Sequence Length

250 nt

GC Content

0.3320

AGCUAAGUAGGUAACAUAAUGGAACAAGGAUAAAGUUGGGAGUUGGGGAGCUAAGAAAGGCAUGUGUUCCCUAAAAGGCAGCCCAGGUCUCCUUGUUGUCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGUAUGGUGGCAUAGCCUUCCAGCCAAAAGUUCUAUUUUAGAGAUAUUAUAAUUCUCCAGUGUGCAGUAUUUGGCAUAUAGUAUGUACACAAUAGUGUCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-44.80 kcal/mol

Ensemble Metrics

Free Energy: -49.52

Frequency: 0.0005

Diversity: 46.37

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((.....(((..........((((((((...(.(((((..(((((((((..(........)..))))))))).......))))).).))))))))........................................................(((.(((...)))..))))))...))))((......((((.........))))..(((((((.((((........))))))))))).........))

Thermodynamic Ensemble Prediction

.(((({{({.,,.,{,,..,({((((((((...(.(((((.,(((((((((..{........}..))))))))}....,..))))).).))))))))........................................................(((.(((...)))..)))|||,,,.,||{{{,..,.{{((.........}})),,||||||..}}}}))))...,}}},({.{{{{....))))}).