Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr2_0394900

Sequence Length

337 nt

GC Content

0.3294

GUGGUGCCACUGCACUCCAGCCUGGCAACAGAGCGAGACUCCAUCUUAAAACAAACAAACAAACAAACAAACAAACAAAACCAUGCAUAUAUUAAGCCUGCUCUCAAAGAUAAUCUCUUUUAAUAGUAAGUGAAGUUUAGCAAAUUCUAGAACCUGUAGGAUGUUACUUUUACAUUGCACCUAAGGCUGAAAAUUCAGAGAAAUAUACAAUCAUUAUGAAAUACAAUGUUCAAUACAAAAGCAUCCUUUGGUUAGGAGUAAAUUAUUCCUUUGAUCUUAAUGAGUUCAUAUAAUAUGGAUGAGGAACUAUAAUAGCUAAUUUUAUUUAAAGAAGGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-50.74 kcal/mol

Ensemble Metrics

Free Energy: -58.46

Frequency: 0.0000

Diversity: 74.00

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((((....)))))...(((((....))).))((((...((.(((((..........................................)))))..)).)))).......))(((((((.....(((((((((((.(((..(((((..((((...((((((((......((((((..((...))((((....)))).........................))))))..........))))))))..)))).)))))......((((((............(((((((...)))))))))))))........))))))))))))))..)))))))

Thermodynamic Ensemble Prediction

(((((((....))))}...(((((....))).)){{{{.....||||.....................................{{.........},.})}}}}...,,,..})(((((({.....((((((((({{{(((..{(({(..((((...((((((((...,..((((((..,,...},((((....))))............,,,...}},....))))))..,.......))))))))..)))),|||||,...|}|||||{..,,{,......{{{{{{{...}}}))))})))},,,},,,,.))))))))))))))..)))))))