Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr2_0395700

Sequence Length

417 nt

GC Content

0.3573

GUCAUCUAAAUACAGUAUCUGAUAACUUUGUUUAAAUGGUAAACAUGACUAUUAAUUUCUUUUAAGCUUAGAUGUACAAUAAUUAUUCCCUGAUUUGAAAGAGAAUCAAUAUGAAUUGAAAAUUACACUAAAUUCUGAGGAAACAAUAAUAUUCAGUCAUGCAUUCUUUUCAUAGGCCUCUGCAAUCUGUCUUCAGGAUCCAAAUUUGCCUGGAGCUCUCCUCUCCAAGGUCAUCAGCUGACCUUCUUCAUAUGCAAUACUUCUUCAUUUUAUUUUCCUAGCAUUUCUUACUGUCAACUAUCACUUCCUCAGCCUUCAUGACAACAUACCAUCCUGAAUCACUUCUCACCCUUCUCUACUUAUCUGGGUUAAUUCAAACAUUACCCAGAGCCUAUUAAGACAGCGCCACAGGACUAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-64.90 kcal/mol

Ensemble Metrics

Free Energy: -72.53

Frequency: 0.0000

Diversity: 78.83

Structure Visualization

Structure Prediction

MFE Structure Prediction

((.(((..............))).))((.((((...((((....((((((((((.(((((((.....((((.((((........((((..((((((......))))))....)))).......)))))))).....)))))))...))))....))))))((..((((...((((((..............((((((((...........(((((.......)))))((((((.....)))))).......((((.........................)))).......(((((......................))))).......))))))))........................(((((((.(((......)))))))))))))))).))))..))))))..)))).))

Thermodynamic Ensemble Prediction

((,(({,,{{{,.,,{....}},.))|,,||||,.,||{{...(((((((((((.(((((((..,,.((((.((((...,..,,(({{..((((((......))))))....)))),,.....)))))))).,,..)))))))...)))),...})))))),..{{{{...{((({(,,.,{,...,{({,((((((((........,..{((((.......))))|((((((.....)))))),......{(((.........................)))}.......(((({..............,,......))))).......)))))))}........................(((((({.{{{......})})))))))}}}}}}.}))),,).))}}.,))}).})