Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr2_0615900

Sequence Length

333 nt

GC Content

0.4204

UUUAUUAUCCAUUUCUUCUUCCCUUUCCUCCUGCCCUUAAAAAAUUACACAGUUCAGUGGGUAAAGUUGGAUGACCUUUGGACAUUAUAACAUGGCUACUUUUUUUGCAAAAUUAAAUCAGAAGUGGAUGUGACUUUCUCAAAUUGCAUUCUUGGUGGGGCACAGUGGCUCAUGCCUAUAAUCUCAACACUUUGGGAAGCUGAAGCGGGAGUAUCACUUGAGACCAGAGGUUUAAGACCAGCCUAGGCAACAUAGUGAGACCCCAUCUCUACAAAAAAUAUUGGCCAGAUGUGGUGGCAUGGACCUAUAAUCCCAGUUACUUAGGAGGCUGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-70.10 kcal/mol

Ensemble Metrics

Free Energy: -77.12

Frequency: 0.0000

Diversity: 90.55

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((((((((((((.((((((((((.(((..((.............))..))).))).))))..))).))........(((......)))((..........))...........))))))))))).......((((....((.((((.(((((((......((.(((((((.....((((((....)))))).((....))(((.((.(((((((...((..(((((.......))))).))...)).))))).))))).......(((......)))((((....))))))))))).))......)))...)))).)))).))))))

Thermodynamic Ensemble Prediction

.....((((((((((({{.{(((((((((.(((..({.............})..))).))).))))..))).}},{..,||.{{{.....,}}}{{,,........},...........))))))))))),,.....((((....((.(((({(((((((......((.{((((((.....(((((,....|))))}.{|,,,,}}{{{.|{.((((({{...((..(((((.......))))).))...}}.))))).|}|}|,,,,...(({......})){{{|,,,,})))))))))).)).....,))),..}}}},))))}))))))