Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr2_1019200

Sequence Length

368 nt

GC Content

0.5054

GUGGGAACCGGCCUCACCCAGAAGAUGACAGUGAAAUAGAGGACAAGCUCUGUGGAGGCCUGGGGUAAAAAUAUUCCAGGAAGAGAGAAAAGUAAGUUCAACAGCCCCAGGAAGAAGUGUGACUGGCAUGUUGGAGGAUCAGUACGGAGGCCAAUGUGAUGAGCAAGGAGGACAGGAACAGAAGCUAAAGAUGGCAAGCAGGACACCGGAUCCAGCAGGCUCUGCAGAGCGAGGACACAGGCUUGGAUCUGAGUGACACGGGAAACUACUGGAGGAUUUUAGGCAAAAGAGUGACUUGGUUUUAAAAGAAUAUAUUCUGACUCUAGGUUGAAAAAAGACUGUGGGGGCACCAGAGGCAGGGGGAGGGG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-89.90 kcal/mol

Ensemble Metrics

Free Energy: -97.51

Frequency: 0.0000

Diversity: 97.55

Structure Visualization

Structure Prediction

MFE Structure Prediction

((....))(..((((.(((................((((((......)))))).....(((((((((....)))))))))................(((((((...((((..(......)..))))..)))))))..((((....((...))....)))).(((..((((..(((((......((((....))))........(((((((((((((..((((....))))..........)).)))))))).))).(((.........(((((....)))))........))).(((........)))......))))).))))..))).........((.(((.....))).))...))).)))).)

Thermodynamic Ensemble Prediction

((....))(..((((.(((................((((((......)))))).....(((((((((....)))))))))................(((((((.,.((((..(......)..)))),.}))))}},,,((....,{|...||..}}}}.|.{{(..{{{{..{{{{,......((({....)))).....,,.(((((((((((((..{{({|||.}}))..}....,..))}}))))))).))).|.{{{....,|.|||,.,..,|||||,|...,,,,},.|||||}|||...,|,.....})))}.)))).,))).........((.(((.....))).)).,.,))})))).)