Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr3_0116600

Sequence Length

255 nt

GC Content

0.5961

GUGCAAUACCCGUUUCUGUCCUCAGAGUUCCCAAUCUGCUGAGGACAGACAAGCCCCUGCCCUCAAGAGCUCCCUGACACUAUUCUAAGAAGGCCCGUCACCAAGCCCCAAGGCAGAAGGGCCCCAGAGGACAGGGCCCGGCGGCUGGCAGUCCCUCUGCAGUAAGAAUCCAGUCCCAGGAGCACACUGUCUUCCUGAGGCCAAGAAGGGUUCUCGGGUAUGAGGAAAGAAGGGCAGGGGAGGGUGGCCAGCUCA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-98.50 kcal/mol

Ensemble Metrics

Free Energy: -102.37

Frequency: 0.0019

Diversity: 58.42

Structure Visualization

Structure Prediction

MFE Structure Prediction

..((..(((((...(((((((((((((........)).)))))))))))....((((((((((......((((((((.(((.((((.....((.......))..(((....))).....((((.(((((((((((((((((.(((((((((.....))))..........))))))).)).)).).))))))).))).)))).)))).)))..)))))...)))......)))))))))).)))))....))...

Thermodynamic Ensemble Prediction

..((..(((((...(((((((((((((........)).)))))))))))....((((((((((......((((((({.,{,.{{{{.....(((((.{{.....(((....))).,..}||||.(((((((((((((((((.(((((({{{,...,))).....,}},,,)))))}).)).)).}.)))))))||||,||||..}}.,))),})))))...)))....,.)))))))))).)))))....))...