Sequence Details

BLAST PRIMER
Symbol
hsa_chr3_0290300
Sequence Length
490 nt
GC Content
0.3469
GGGCUUACAUCUAGUAAUCAAUUAACAAUUGGAAAGUUUUUCCAUUCAUGCUGUUUCCCUGUCGAUUCCCCUUUUCUUCUCAUUCUCUCCAUUCUAUCUGGCUCAAUGCCCGUUUAGACCUUACCAUAAACUUUGAGUUUAGAUACAAGGAAACAGAUUUGAGCAAUUUGGAAGAUAAGGAGCGUGUCAAAUUCUCAAAAUACUCCACUUUCUUUCUCUAAUCACUCAGACACUGUAUUUUAGGUAUUCAAUAUGUUCUACAACUGUUAAUGUUAAAUUCUGUGGGCAUUUCCUACUUUUAGACUUUAUGAUGCAUCUUCAAACUUCAAAUCUGUAACAAAAGGAGACUUUCCAAAUACAGAGAACCUAACAGUAAGUGACGAAUAGGGAAGGAAAAUUUCUUCAUCACAAGGUUAUACAACCUGUUAUGUACUACUGAGCAAUGGUAUAAAAAUCUUCAUAUCUAGCAAUCUUUAAGAAGAUCUUUGAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-83.77 kcal/mol
Ensemble Metrics
Free Energy: -96.46
Frequency: 0.0000
Diversity: 164.17
Structure Visualization
Structure Prediction
MFE Structure Prediction
(((.((((.....))))..((((.(((...(((((((............)))..)))).))).)))))))(((.((((((.....(((((..((((.(.(((.....))).)..))))((((....((((((...)))))).....))))..(((((((((((...((((.(((((..(((((((((..(((.((.(((((((...............................))))))).)).)))..)))))))))..............((((.((((((((.....)))))....))).))))......))))))))).))))))))))).......)))))...........(((((.((.((((((...(((((.....((((((((....)))))).)).....))))).....)))))).)).)).))).((...(((((.((....)).)))))..))........)))))).....)))
Thermodynamic Ensemble Prediction
(((.{{{{.....}}},.,..........((((({...})))))...,,{{{,,,{{{,{{{,|,,,||,{{{.,,,,{{,,,{{({(((.,(,(({({((({{{,.},,.{{{||},,,,.....|||||,,}}))))))}}}}.))))}.{{{{{{{{|{|...{{{|||{{{{..{((({(({{..{{{,((.((({{{{.....,,,,,,,,,,,,.,,..,,|...,,,|}}}}}||||.}}}..}}}}}}}}}.,,...,,..,,||{{{{.{{{(((((.....)))))....})).,}}}.,,.,.}}}})))}}.})))}}}||||,......(|{,...})}}...,,,})))}}|}|}}}}}}..,}}),}}.))))||||||,...,,}}}|...{{.{((((....))))))}..{((((((........))))))}...{(((((.{{............,}.)))))).,}})))
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