Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr3_0290800

Sequence Length

318 nt

GC Content

0.3491

CUGUGUUCCUAAGAAUCAACUGAUAUUUGGUGAGAACGUAUACAGACUACCAAGACUCUCCCACAGAGAGCUGUGACCACAGGUUUGAGGGCCCAGAAAUUAACAUUUUAACAAGCAUUCCAGGUGAUUCUGAUAUAGCAGAAAACACUACAAAAUACAAUUGUGCAAAGCCAGAUAAAUUUUCAUUUGACAUGUGUGGAAAAAAUAAGAGAAUAAUGUCUGCAAAUGAUAUUAGAUACACUUUGCUUCUUAGGAAGUUUAAAACAUGUUUAAUACUGAUUCUGCUGCUGAAUGAUUAUAGUUUGACAAAGGAAAAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-49.40 kcal/mol

Ensemble Metrics

Free Energy: -57.53

Frequency: 0.0000

Diversity: 115.51

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((.((...(((((((.(((....((((((...............))))))..(((((.....)))))((((....))))(((((........................)))))....))).)))))))....((((((((.....(((((.......)))))....((.(((((.((((((.(((.((....)).))).......))))))..)))))))......(((((((((......(((((....)))))........)))))))))....))))))))......)).)))))(((...........)))

Thermodynamic Ensemble Prediction

(((((,((.,.(((((({.(((...,((((({.,............})))))),.(((((.....)))))((({,.,,,|}},|,||.}}|,.,,|,,,......,,}}.....,,....}}},|}}}||||,,,|||({{{|..,,,,,{{{.......||||},..,{,{((({,.{{{{{{,{{{|{({,,|,},|,........|}},,|,,||||}},....}}|||||{{{,...,|,|{|||,,,.))))),,,..,,,))))}))},.,,,})})}}}}..,.},)).))))){{{...........}))