Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr3_0365900

Sequence Length

250 nt

GC Content

0.3400

AAAGAAAGAUGGCCAUGACACUAGGGCUAGCCUUGGCAAAUGACUUGCUAUUUUCAAUUCUAGAAGAUUUUCCAAGUGAGGCCUAAGUGUUCACAAUAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCUGCGGUAACAUAAGCUCCCUCCACUUCUCCAUGGAGAGGCCCACUUAACAACUAACUGUAGAAAACUUCCUACCAUUAGCCCCCUGUGAGUUAAUAAAU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-34.00 kcal/mol

Ensemble Metrics

Free Energy: -38.23

Frequency: 0.0011

Diversity: 48.69

Structure Visualization

Structure Prediction

MFE Structure Prediction

..........((((..((((((.(((((..((((((.((((..(((.(((..........)))))))))).))))).).))))).)))))).............................................................((..........))...(((((........))))).))))(((.......((((..((((........))))..))))......)))...........

Thermodynamic Ensemble Prediction

.....,{{..((((.,((((((.(((((..,(((((.((({..{{{.{{(,,........}})))))))).))))).}.))))).))))}},............................................................{{,,........}}...(((((........))))).)))),,}}}.....{{{{..((((........))))..}}}),....,}}}.}},,......