Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr3_0367100

Sequence Length

177 nt

GC Content

0.4463

GUUGACAUUCCAUAAAAUGGUAUAAUUUCUUGCUCACCAUAUAUUGUGUGGGGAAGAUGAUGCUGGGGAAAAAACUGAGGCGGCAUAUCUCCAGGUCCGGUAACAGGUGGGUAGUAAGCCGUGUGUGAGUUAUGAAUAAAAUGUGGAUGGUGAGUCAGAUAGGGAGGGAGAUGAUGG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-38.60 kcal/mol

Ensemble Metrics

Free Energy: -42.78

Frequency: 0.0011

Diversity: 28.79

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....((((((((...))))....((((((((((((((...((((((.((((((..(((.((((..((......))..)))).))).)))))).)..)))))...)))))))).....((.(((.(((.((((.(............).)))).))).))).))..)))))))))).

Thermodynamic Ensemble Prediction

,....{{{{((({...||,,....,{{{,(((((((((...((((({.((((((..(((.{(((.{(,......))..)))}.))).)))))).}..)))))...)))))))),....((.(((.(((.((((.{.,......,...}.)))).))).))).))..}}},,,,))).