Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr3_0373500

Sequence Length

160 nt

GC Content

0.3438

GUGAAGAUUUGAGGCACUAGGAAAACUGUCACAGCUACUAAGUAGUAAGACAUUUAACCUAUACAGGUAAGAAAAAUUUGAAAAAGUAGGUGAGGAGGCAAAACGAGAAACCAGGGAAGAAGAGAGAUUUUUUUUGUAGAAUGUUACAAUAUAUUUUCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-17.70 kcal/mol

Ensemble Metrics

Free Energy: -21.30

Frequency: 0.0029

Diversity: 47.58

Structure Visualization

Structure Prediction

MFE Structure Prediction

((....))((((.....((((..((.((((...(((((...)))))..)))).))..))))..(((((.......)))))........(((.....(......).....))).(.((((((((....)))))))).).((((((......))))))))))

Thermodynamic Ensemble Prediction

((....}|(((,,....({{(..,,.((((...(((((...)))))..)))).||.,|||}...}}}}.,,....||{{|...,.||,(((.....(......).....)))...{((((({{....)))))))|{|{{..,,|}}},..}},}))))))