Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr3_0373600

Sequence Length

282 nt

GC Content

0.4149

ACUGACAUCUUCUCUAACUUUGCCCCGUACUCCUUGUGUCUCUCAUCCUUAUCAUCCUGGGCAGAGUUUCCCUUUUGGCAGGAUGUAGCCUCAUCAUUCCCUCCGCUCAACAGAACCUCAACUUCUAGAGUAUAAGCUCCCAGAAGAUAGGAGUUUUGCUUAUCACUAUAUUCUCAGUGUCCAGCAAAUAGAGGUGGUUAAUAAUCAUUCACUGAAUGAAAUAAUACAUUUUCCUUAUGAAUUCCUAUUAGCUUGCUGAUCUCUUCACAGGAGAUAACCCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-52.90 kcal/mol

Ensemble Metrics

Free Energy: -59.39

Frequency: 0.0000

Diversity: 72.58

Structure Visualization

Structure Prediction

MFE Structure Prediction

.(((.((........((((((((((..........(((.....)))............)))))))))).......)).)))((((......))))....((((.((((...((((.......)))).))))....(((((.........)))))((((((...((((........))))...))))))..)))).((((((((...(((((.(((..((((........)))).))))))))...))))))))..((((((((((...)))))))....)))

Thermodynamic Ensemble Prediction

.{,,,{{{{,,....((((((((((.{........({(.....})}..........,.)))))))))).......,||,}}||||,.,,,,|,,,....,,,,.|,{{...,||,,,{,..((({{.((({....}))}..}}}}}.,,})}}}{(((((...((((........))))...))))),..))))}((((((((...(((((.,{{,,({{{......,,)))}.}}})))))...)))))))).,,{{(((((({...}))))))....}))