Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr3_0374600

Sequence Length

250 nt

GC Content

0.2360

GUGGCAAGAGUAAAUGCUCAGAAGAGGGAAAACGAAUAUAUUUGUUUCUUACUGAUCUCCAUUCAUUGGACUGUGAGGAAAAGGUGAAAGUAGAUGAAUUNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAACAUCUAGUAUUCUUGGAUUAAGGAAACAUUUAUAUUCUUUGAUUGCAAUUCAUAACUUUAAUUCAAUAUUUAAAACUUUGAGUUUUAUAUACCUGUU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-33.71 kcal/mol

Ensemble Metrics

Free Energy: -38.03

Frequency: 0.0009

Diversity: 37.37

Structure Visualization

Structure Prediction

MFE Structure Prediction

.(((((........))).)).((.(((......(((((((..((((((((..((((((((..((((......)))))))......((((.((((((.........................................................)))))).).)))...)))))))))))))..)))))))..(((.......)))..............(((.(((((((...))))))).)))))).))

Thermodynamic Ensemble Prediction

.(((((........))).)).((.(((......(((((((..((((((((..((((((((,.{{{{,,,...}}}}}}...,||.{{,(.((((((.........................................................)))))).).})),,})))))))))))))..))))))).,{{{.,..,,,|,|.......||,,},,,,,.{{(((({...))))))).,,,))).))